rs244939990 SNP Detail

Summary

• ID
  rs244939990
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:106797914 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CAAAGGAAC TGAATTGGAC TGGTAGATAC
  CACATTCCTG CCCTCTGCAC AGTTCTGTGG GATCCTGTCC AGGAGTTGAA AGAGGATAGG
  GAGTGGGGCA AACAGCCAAT TAGGACATGC CCTCTAATAT TCCAAGGCTT TATTCCAATT
  R
  TCTGTGCTTT ATTTTCTTTG GGATGACTGT CAATGTCCTA ATGAAGTGAA CATTTCCCTT
  AACAATCATC TGGGAACCTG TAAAGACGCT AAGTGCAATA AAGTCCACAA GCTGAAATTC
  TATGCAATAT AAAATTTGAA CTTATGTACA                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321886897	CHEV_6_106770947	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244939990					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:106797914 () rs orientation: forward

Symbol	Name	Function Class
Rr635975	regulatory region 635975	56 bp distal
Rr635976	regulatory region 635976	1474 bp proximal
Rr635977	regulatory region 635977	1557 bp proximal