rs244849611 SNP Detail

Summary

• ID
  rs244849611
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:148222116 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGCTTCCTG TGATTGGTCC
  CCTTTCTCTC CTTCTCTGTT TCTACGTGCT CATTGTTCTG GGAACTGGAC ACAGATGGGA
  AAGATGCTGA GTCTTTATTA ATTAATTAAA TTTATTTTTT TACATTTATT CATTTATTTA
  TTGGTGGGGT AGCATGTGTG GGCTTGCAGG AGTCGGTTTT ATCCTTCCAC CATGTGGGTC
  Y
  TGGGGATTGA CAACCTCAAG GTTGCCAGCC TTGGCAGCAA GCCCTTTTGC CCTCTGATCC
  ATCTCGCCCT CCCAGACGAT GCTTATGTGA TCCCGTCTGT GGACAGCAAC TTGGCTATAG
  AAGCATCTCG CAGGTCTGCA CACTTTGTTG ACAAGGGTTG TATCTAATTT GCTTGTGTGT
  GTGTGTTCAT CACACCGCTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321417595	CHEV_4_147511768	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244849611					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148222116 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Mad2l2	MAD2 mitotic arrest deficient-like 2			Intron
				Noncoding-Transcript-Variant
Rr604600	regulatory region 604600			1978 bp proximal