rs244846309 SNP Detail

Summary

• ID
  rs244846309
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:141407386 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTTGATGGG AAGAGCTAAC
  TTCCTATTAA GAACATAAGA TTTGATCTCT CCCTTATCAC AGCACAAAAC GTGCAACAGA
  AAACCTAAGA AACATCTAGA AACCATTTTT GGTATACAGG ATGCAGAAAC TCCTATCTGG
  GGAAACCTAA TGTTTGAAGA AGGTAAGAGT GAATCAGAGT GGTGAGGAGC CAAGGACCAC
  G
  CCAGGCGGCA GTCCTCTCAG GAGGGCTGCC CTCTAACCTC CCCCTCCCGT ACTCCCAAGA
  TGTGATGCTT CCGCTGGTCA AAAAAAGTAA GGCACGAAAG AAAAGCAAGA ACATCAAAGG
  CTCACCCCAA GTCCTGACTG CGGCTCAGTG CAAGCCCTGA GGGGATGCAG GAAACACCAA
  ATGCTATTGT GTTAACTACC                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321388953	CHEV_4_141235990	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244846309					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141407386 () rs orientation: forward

Symbol	Name	Function Class
Rr377311	regulatory region 377311	within coordinates
Rr603857	regulatory region 603857	730 bp distal
Rr603858	regulatory region 603858	1718 bp proximal
Tssr44357	transcription start site region 44357	524 bp upstream