rs244774320 SNP Detail

Summary

• ID
  rs244774320
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr17:32904906 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGCTTATTT CTAGATAACC
  AGCTATCTGA AGCCAAAAAG TCAGAGTGAT CCTGTTGGCT TCAGACATGG GGTTTTTCAG
  GTAACATCTC CTGGCAGTTT CATTCAGGAA TTTTGGGTCT CTCCCTCTCT CCCTCTCTCC
  CTCTCTCCCT CCTCCTCCTC CTCCTCTACC TCCACCTCCT CTTCCTCCAT ATTACTGCCT
  M
  TTTCCACCCC ATGGATCTCT CCTCCTACAA ACAGCCTTCA TTATTCATAT CCCTGGTCCA
  TTATGCCTGA TGGCCCCAAC CTTCTTCCAA CCTCCCAGTC TCACTGTCTG TCCATTTGCC
  CCACAGGATG CCACAGTTGG ACCTGTCTTG GCTGGGACTG AGGCTGGAGG CATCCTCACC
  ATGGCTGCTT TTGCTGCTGA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325362850	CHEV_17_32822877	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244774320					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:32904906 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Cyp4f15	cytochrome P450, family 4, subfamily f, polypeptide 15			Intron
				Noncoding-Transcript-Variant
Rr525792	regulatory region 525792			243 bp distal
Tssr143733	transcription start site region 143733			336 bp downstream
Tssr143734	transcription start site region 143734			317 bp downstream
Tssr143735	transcription start site region 143735			289 bp downstream
Tssr143736	transcription start site region 143736			255 bp downstream
Tssr143737	transcription start site region 143737			161 bp upstream