rs244642618 SNP Detail

Summary

• ID
  rs244642618
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:59786315 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AAAGGGGGA ACATGATCAG CAGAAAGATA
  AATTTTACTC ATGGCCAATT GTTTTGCCTT TGATTTTTGT GACTAGTAAC CCTTGAAATC
  ATTTTGTTTT CTCCTTGAGA GTTCTTGGAA CTTCTATagg ccagtcaggg ctgcataggg
  M
  gaccctgtct caaaaaCAAG GGGAGGGAGG TATTGTGAAC TTGTATAACC AAAAGGAGCC
  TGAACCATAG AACCACCCAG GAGACTATTT GTGCATTCTC TTTTCTTTCT CCTTTCTCTT
  ATTATGTCAC GCAGGCTATT ctcaagcacg                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321141385	CHEV_4_59799187	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244642618					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:59786315 () rs orientation: forward

Symbol	Name	Function Class
Rr376572	regulatory region 376572	172 bp downstream
Rr593136	regulatory region 593136	1959 bp distal
Rr593138	regulatory region 593138	148 bp proximal
Rr593139	regulatory region 593139	520 bp proximal