rs244517811 SNP Detail

Summary

• ID
  rs244517811
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:5532119 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CCAAGTTGA AGAATTCATT AGAATGCTTA
  AATAAAGGGA CAAAATGCAG AGGTGTGGCT GAAGTTACAA GAACAAAGGA CAGTGATGCA
  CTTAGGGGTT AGAGTGAAGG CAAGATGCTA CCAGATACCA TCAGCAGGGA CTACACAGAA
  Y
  GCTGGATCAG AAACAGCCGC TGCTCGCTGA ATGAGAGCTG TGGTCTCAAG GCTGCAGAAA
  TTCGTTTGTT TGATAGAGTA GGAGGGGGAC ATATATCACA Atctctctcc ctctctctct
  ctctctctct ctctctctcc cctccattct                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321451372	CHEV_5_5482119	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244517811					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:5532119 () rs orientation: forward

Symbol	Name	Function Class
Gm30325	predicted gene, 30325	within coordinates
Rr607007	regulatory region 607007	177 bp distal
Rr607008	regulatory region 607008	338 bp distal
Rr607009	regulatory region 607009	271 bp distal
Rr607010	regulatory region 607010	1201 bp proximal
Tssr45090	transcription start site region 45090	565 bp downstream