rs244468846 SNP Detail

Summary

• ID
  rs244468846
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:113698100 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAAATAATT CAGAGCCCCA
  TGATATCCTC ACCTACTGTG AAGTTTTGGA GGAGAGTGGG CTCTGTGGGA TCTCTTGGTG
  CAGGTGAGGT GTGGGCTGGG TTGCAACTCC TGTGAGGAGA TAGACCATCT GGTAGAGGTA
  GCTGAAATCC CAACATCATA TTCATAGGCC TGTCACCCAC CAGAACTTAG AAACCATTTA
  C
  CCCTGGGGCC CAGGGGTCTA AAGGTGAGGT GTTGTGGAAA CACTGCGGCC CTCCAGTCTG
  TGAGGACAGA AAGCCTGTGC ATGGTGACCA GGCATCGGCT GAAATATGAA GCTTGTCCAC
  TCAGCCGCTG TAAGCCTTTG GAGGCAGGAG GTGCTGGTGT TGATCTTAGA TAAGACCACA
  AATGAACAAA CACAGGTTGC                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321911657	CHEV_6_113671133	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244468846					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:113698100 () rs orientation: forward

Symbol	Name	Function Class
Ghrl	ghrelin	1259 bp upstream
Gm44033	predicted gene, 44033	1861 bp downstream
Rr636588	regulatory region 636588	within coordinates
Tssr62470	transcription start site region 62470	1671 bp upstream
Tssr62471	transcription start site region 62471	1256 bp upstream