rs244362441 SNP Detail

Summary

• ID
  rs244362441
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:156146956 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCACAGGATG AGTGAGCACC
  CTAAATGCCA CATGAACGCA GATATCTTCT GATGATATTG AAAGGACTGA GCCTGGATGA
  GAAGAAGATG ATCTGAGAGG CTCACCCGGT TCCTGCTCAC ATGCACAGGT ATCTGACCCT
  ATCTCTAGGT GGGATCCTAG ATAGATCGTT CTTTCCGTCA TCAAGAGCTG TGTGCTACCA
  R
  GATGAACAGA GAGATTCGGT CAGTCCTAGG TCAGAATGCT GAAGATCTAG TGTAACCTCC
  CACTCTTTCC CTCTCATGCA CAGCAGAGGT TCAATATAGA CTGAGCGTCA GAAAGAAGGA
  GCACTCTCAA ACTGTAAACT CAGCTCTCTT CCTTTCTTGT AGATGTAGCA GAGAACCTCC
  TGCCTTCACA GTTGCTATTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321445020	CHEV_4_155436608	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244362441					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:156146956 () rs orientation: forward

Symbol	Name	Function Class
Gm52714	predicted gene, 52714	1775 bp upstream
Rr377474	regulatory region 377474	1389 bp upstream
Rr606657	regulatory region 606657	1373 bp proximal
Rr606658	regulatory region 606658	1858 bp proximal
Tssr40789	transcription start site region 40789	1840 bp upstream