rs244244268 SNP Detail

Summary

• ID
  rs244244268
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:106716031 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATTTCTGAGT TCGAGGCCAG CCTGGTCTAC AGAGTGAGTT
  CCAGGACAGC CAGGGCTATA CAGAGAAACC CTGTCTCAAA AAACCAAAAA AAAAAAAAAA
  R
  AAGAAGAAGA AGGTGAGGCA GGAGGTGAGG ACATCCTTGA GACTTTGCCT AAATAAATAA
  AAATATTTGG GCTGAAGAGA TGGCTCAGTG CTTATGAGC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321247422	CHEV_4_106531439	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244244268					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:106716031 () rs orientation: forward

Symbol	Name	Function Class
Gm12746	predicted gene 12746	316 bp upstream
Gm69780	predicted gene, 69780	437 bp downstream
Gm70282	predicted gene, 70282	1007 bp upstream
Rr376973	regulatory region 376973	164 bp upstream
Rr596849	regulatory region 596849	768 bp proximal
Rr596850	regulatory region 596850	1018 bp proximal
Tssr38192	transcription start site region 38192	887 bp upstream
Tssr42651	transcription start site region 42651	543 bp downstream
Tssr42652	transcription start site region 42652	753 bp downstream
Tssr42653	transcription start site region 42653	764 bp downstream