rs244217546 SNP Detail

Summary

• ID
  rs244217546
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:62579238 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CAGAGAACA ACCTGCCTCT GTGCTCTGTC
  TTACTTTCCT TTTGCTCCAA GCTAGTCTCT AGAAAGGCTG CCACTCCCCA GCCATTGAGT
  GTTGGATGAT CTGCCAGACA CTCCTGTGTG AGCCAGGCAT GGCTTCTAAC TCCTGCCCTT
  Y
  GCTTTCTCTT TGACCTTCAC TAGAGCCTGA TGTGGTATGG TATCCCCTTA AGAATAGACT
  CCTGCTCTAC CTAGTTTGTA GGTACTGGAT CTTCAAAAGG TTAAACTTGC TGAGATCACA
  CAGCTAATGT CTGCACACAT TAGTGGGTCA                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321142891	CHEV_4_62322035	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244217546					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:62579238 () rs orientation: forward

Symbol	Name	Function Class
Gm52741	predicted gene, 52741	within coordinates
Rgs3	regulator of G-protein signaling 3	Intron
Rr398306	regulatory region 398306	512 bp upstream
Rr593377	regulatory region 593377	within coordinates
Rr593378	regulatory region 593378	621 bp proximal