rs244212612 SNP Detail

Summary

• ID
  rs244212612
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr18:65175911 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAGCGTCTA TTACAATAAA
  ATTCACTGAT TTCTCAGCAG CTTTCATCCC CGTGTCTTTT AGAAGTTGCA CACACAGTGC
  TATGTATAGA TAGATCTACT TTGCCGTTTT AGTAGCACAA TCCTGACGAT AAGAACGGCT
  ATCGGTTGAA AATGGCCAGC TTATGGAAAT TTCATGTTCT GTAACTCGTC CTCTTGAAGA
  R
  TTAGCATAGT TCTGGGTCAG ATTGGCTTTG ATCTCATGAG TCCAAGCATG GGGAAGAGCT
  GGGAATGTTC CTGGTCTGAG CCGGGGTGTG GAGCAGAGGC TGATGCACAT GGCAAGGGAC
  AGGACAGCAG GATTGCCAAA CCTCTCCTCC CTGCCAGACT AACAGCTGAG CTGCTGCTAC
  CGGGCTGGCT TGCCTGTCAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325655607	CHEV_18_65202494	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244212612					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:65175911 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Gm41756	predicted gene, 41756			within coordinates
Nedd4l	neural precursor cell expressed, developmentally down-regulated gene 4-like			Intron
				Noncoding-Transcript-Variant
Rr539432	regulatory region 539432			1954 bp distal
Rr539433	regulatory region 539433			22 bp proximal
Rr539434	regulatory region 539434			663 bp proximal