rs244167590 SNP Detail

Summary

• ID
  rs244167590
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:113598703 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAATTTTAC TTACTGTCTT
  TATGTATGTA TGTGTATGTA TGTACTATCA GGTATGTGTG TGCGCAAACT GCATGCCTGG
  TACCCACGAA AGTGTCCGAT CCCCTGGGAC TGGGGTCCCA TATGGTTGTG AGCTGCCAAT
  CAAACCAGAG TCGTCTGCAA GAGCAGCCAG TGCTCCTAAC CAAGGAGCCA ACTCTCCACC
  S
  TATTTTTATT TTTAAATCAT GTATGTATGT TTGTTTGTGT ATGGGGGCGG GGGGGGGCTT
  GCACATGTCT GTGGAGGTCA GAAGAGGGCA TTGAACTCCC TAGACCTGGA GTGACAGGCA
  GTTGTGGGCC ACCTGATGTG GATGCTGGGG ACTGAACTCA GGTCCTCAGA GCAGCACACT
  CTTTAACTAC TAAGCCATTT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321911127	CHEV_6_113571736	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244167590					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:113598703 () rs orientation: forward

Symbol	Name	Function Class
Cpgi17851	CpG island 17851	1929 bp proximal
Rr636555	regulatory region 636555	1839 bp proximal
Tssr62461	transcription start site region 62461	1786 bp downstream