rs244102860 SNP Detail

Summary

• ID
  rs244102860
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:9664625 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAGGTATAT ATCAAAATTA
  CATGCCAAGT TGTGACTCAG TAAGTTGGCT TGGAAGAACT AGTCATGATC TTATTAGAAA
  GAAAAAGAAG AAAAAAAAAA AGAAAGAAAA GAAAAGAAAA AGAGCAGAGG GCTTCACGCC
  TCCCTGCACG TCATCTGGTC GGTGTGTTGC ACTGCAGGCG CCCTGGGAGT AAAGGTGGCC
  R
  ATGCCCTGTT CTTTCCATGT GTACACCAAG CATCTCCTAA CTAGAGAACG AGCACAACCA
  TCAACAGCAG AGGCACAGCA ATCATCCTGA TTGACAACCA GATTTGGCTA AGCCATAATA
  AGGCTGGTTG TGAGAGGTTT CAAGTACTGT GAAATTCTTC AGAAAGCCAG ACAGAAACCA
  TGTCTCAAGA AGAGGCTGCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320651640	CHEV_3_9599565	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244102860					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:9664625 () rs orientation: forward

Symbol	Name	Function Class
Rr374491	regulatory region 374491	within coordinates
Rr573453	regulatory region 573453	1230 bp distal
Rr573454	regulatory region 573454	1284 bp distal
Rr573455	regulatory region 573455	138 bp proximal
Rr573456	regulatory region 573456	1095 bp proximal
Zfp704	zinc finger protein 704	Intron