rs244010699 SNP Detail

Summary

• ID
  rs244010699
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:138109713 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAACACACAA ACACAAACAA
  TGAAAGCTAT TTCTTTGTAT TCTTCTAACA TTACCCATAA TTATTATATT TCACATTTAT
  GATAGTTTCT CTAGCTATTT CTATTCTCTC TCTCTCTCTC TTTATTATTG AGATGTGTTC
  TCATGTAAGA CCGGATGGAC TCGAGCTTCT TATCTAGTTG AAGTTGGCCT GGAAAAATTT
  W
  AAAAAGATTT TATTTATTAA CTTATTTTTA TTTTGAGTTA GTACCTCACT ATGCCTACCT
  AAGCTGCCTG GAACTCACTA TGTAATCAAG GCTGGCTTCA AACTTACAGA GATCTGCCTG
  TCTCTGCCTC CTGAAGGCTA GAATGAAAGG TATGGACCAC CGTGCGTGAC TTGGTTTTTT
  TTAATCTTAC GCATATGAAG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321372972	CHEV_4_137938317	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244010699					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:138109713 () rs orientation: forward

Symbol	Name	Function Class
Rr602902	regulatory region 602902	1913 bp distal
Rr602903	regulatory region 602903	248 bp proximal
Rr602904	regulatory region 602904	1318 bp proximal