rs243981518 SNP Detail

Summary

• ID
  rs243981518
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:41895638 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTTTTGGTTA GATTGTCCAG CTAGAATAAT CTATTTTTTT
  TCTTTTTCCC GTGGAGAGCT TATTTATTTA TTTATTTTTA ACCTGCAAAT ATCCCAGGAG
  Y
  ATTATTGTGT AGATGTATAA TATGGGAATT CTAAACTGTT GATTTACATT CTGATAATTG
  TAGCTGAACA GCAACCATGC CTGCCTGGTC ACTCGTGGG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320730077	CHEV_3_41745125	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243981518					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:41895638 () rs orientation: forward

Symbol	Name	Function Class
Rr576007	regulatory region 576007	1015 bp distal
Rr576008	regulatory region 576008	1740 bp proximal