rs243887498 SNP Detail

Summary

• ID
  rs243887498
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:152055208 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TAGCCCGGG GCCTGTGCAT GCTAGGCAAG
  CACCTGTAAC CCCCTAGCTG ATTCTTTGCT TTTTATTCTG AAACTAGCCT CACTGTGGTA
  TCTTTACCTC cagagggcag agggcagagg gcagagggca ggggcagagg gcaggggcag
  R
  gggcagaggg cagagggcag gggcagagCA GCAGATCGTG AACTCACTTT GTAGCCTTGA
  ATTTGTTACt ttttttcctt tccttttttt tttttttttt ttctttttGG TTATTTTGAT
  GGAGTCTCAT AAAGGCAagg cagaaacttg                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321028728	CHEV_3_152012535	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243887498					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:152055208 () rs orientation: forward

Symbol	Name	Function Class
Rr587535	regulatory region 587535	1910 bp distal
Rr587536	regulatory region 587536	1037 bp proximal
Tssr32407	transcription start site region 32407	997 bp downstream
Tssr32408	transcription start site region 32408	433 bp upstream
Usp33	ubiquitin specific peptidase 33	Intron