rs243848049 SNP Detail

Summary

• ID
  rs243848049
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:141747625 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAAGATATG TTGACAATGC
  AAAAAAGACG CATAAGTTAC ATTTGAGTAT TTACCAATGA AGTTCATAGA AGTCACCACG
  GTAGCTTAGT TTTTCATTCT AAGACTAGTA AGTCGCATTT CATGGGCTGG ACTATGAAGT
  TACTTCTTAT TCAAATAAAG GCGTATTAAG GAACCACCCA GAGATAAAGC CTTGTCTTCT
  Y
  GAACTCATTT GCTATGTATA CAGTGAATAA GAGTATGCTC TATAAACAGC AGAGATTATA
  CTATATACTG TAACTGAGCT GAAAGTCTCC CTTGGGCACA GCGATGCATA AATGATTGTC
  ACAGCTATCT CGCTAGTTCA GATCCTGCAA TCTTATAACC AACTTCTGAA GGACAAAAAT
  GATACTTTGG CTAAGAAAAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320997876	CHEV_3_141704828	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243848049					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:141747625 () rs orientation: forward

Symbol	Name	Function Class
Bmpr1b	bone morphogenetic protein receptor, type 1B	Intron
D3Mit160	DNA segment, Chr 3, Massachusetts Institute of Technology 160	250 bp distal
D3Mit160.2	DNA segment, Chr 3, Massachusetts Institute of Technology 160.2	118 bp distal
Rr586379	regulatory region 586379	1704 bp proximal