rs243758029 SNP Detail

Summary

• ID
  rs243758029
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:132252826 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GCCCTTCAG TTAACCTTCC ACAGATTGTA
  TATTCAAGCA CATCTACCGA GTACCAGGCC TTGTACAGGC AGGCGGGAAT TATATACAGC
  TCTCTGGGAA GAGCATGAGG AAGGAGCTAG CATtccaggt cccgtgagag accccttctc
  W
  agagagtaag gtagaagtgt gatAGggggc tggagatgtg gctcaggggt ttaagagcac
  tgactgctct tccagagatc ctgagttcaa ttcccagcaa ccacatggtg gcttacaacc
  atctgtaatg ggatctgatg ccctcttctg                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321334097	CHEV_4_132081430	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243758029					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:132252826 () rs orientation: forward

Symbol	Name	Function Class
Gm68741	predicted gene, 68741	within coordinates
Rr377208	regulatory region 377208	95 bp downstream
Rr377209	regulatory region 377209	1633 bp upstream
Rr601000	regulatory region 601000	356 bp distal
Rr601001	regulatory region 601001	1265 bp proximal
Rr601002	regulatory region 601002	1357 bp proximal