rs243417494 SNP Detail

Summary

• ID
  rs243417494
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:63071085 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTCT CAAGGTGACA GTGGAGTTCC
  R
  GGTACAGCAT ATTTAGGGCA GAGGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321144508	CHEV_4_62813882	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243417494					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:63071085 () rs orientation: forward

Symbol	Name	Function Class
Ambp	alpha 1 microglobulin/bikunin precursor	Intron
Rr593477	regulatory region 593477	1508 bp distal
Rr593478	regulatory region 593478	1315 bp proximal
Tssr37529	transcription start site region 37529	1365 bp downstream
Tssr37530	transcription start site region 37530	256 bp downstream
Tssr37531	transcription start site region 37531	195 bp downstream
Tssr42025	transcription start site region 42025	220 bp upstream
Tssr42026	transcription start site region 42026	178 bp upstream
Tssr42027	transcription start site region 42027	162 bp upstream
Tssr42028	transcription start site region 42028	142 bp upstream
Tssr42029	transcription start site region 42029	1282 bp downstream
Tssr42030	transcription start site region 42030	1432 bp downstream
Tssr42031	transcription start site region 42031	1942 bp downstream
Tssr42032	transcription start site region 42032	1989 bp downstream