rs243399549 SNP Detail

Summary

• ID
  rs243399549
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:13665425 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGTGCTGAA AATGGATTTC ATTCCTGTAA
  GACGTGATTT ACATGGTAGA TAAAACTTaa agacttggat acttgtactt tatttagaag
  agagtcctaa ccatagtagt aagggaatgg gaagaggggg aggggagagg ggaagggagt
  R
  gggagaggag aggagaggag aggagaggag aggagaggag aggagaggag aggagaggag
  aggagaggag aggagaggag aggagaggat taaaactaca aagaaggaga aaaagctaac
  cacagtacag gggagttcta ggaacattgc                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321748465	CHEV_6_13615426	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243399549					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:13665425 () rs orientation: forward

Symbol	Name	Function Class
Rr626579	regulatory region 626579	216 bp proximal
Samtor	S-adenosylmethionine sensor upstream of mTORC1	Intron