rs243338235 SNP Detail

Summary

• ID
  rs243338235
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:107589195 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGCTCCTTC TCTTATAAGA
  AACCAGTCTC CCTGGACTTA GGCAACAACA GTGCTTACCC ACAGTGACAG AAAGCTCTGA
  TGGTGAAGAA CCAGCCTGCT TTCATCTTAG ACTTAAAGCC ATCTTACCGG AAAGACAAAC
  TAGGTTTGTT CCTAATTATG ATTAAATCTG TTTCCAAGGA CTGCTATGCC CTACCTATAA
  C
  CTTACTTACA AATGGTCCTG TACTGAGTGT TCCAGGAATG ACAATCAGAC CTTTGTTTAA
  AAAGCTGTTT ATAGTCATCT TGTAACCCTA CCTTTGTTTC AAAATGTTAT AAGACCACCT
  GTGACTATCT TATAATGACT ACCTGTTATT ACGACTACCT TGTTAAGCCA CCTTGCAGTG
  TGACTTTGTT TCAGGAGTCT                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321250545	CHEV_4_107404603	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243338235					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:107589195 () rs orientation: forward

Symbol	Name	Function Class
1700047F07Rik	RIKEN cDNA 1700047F07 gene	within coordinates
Gm70287	predicted gene, 70287	within coordinates
Rr747	regulatory region 747	1328 bp proximal
Rr597051	regulatory region 597051	192 bp distal
Rr597052	regulatory region 597052	208 bp proximal
Rr597053	regulatory region 597053	1763 bp proximal