rs243310104 SNP Detail

Summary

• ID
  rs243310104
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:117863680 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAGAACATG GTATATGTGT
  ATGCCCATGT GTGAGTGTGT GTACCTCTGT GTATATGTAC ATTTGTGTAT TCAGTGTGTT
  CACGTGTATA CATGTATCTT CATGTTTGTG TCTGTATATA TGTGTGTGTC CATGTGCGTG
  TGTTGTGTTT GTGTGTATGT TTCTTCATGT GTGTGTCTGT TTCTCTGTGT GTGTCTGTAC
  R
  CATACACATG TTCATAAATA TGTATGTATG TATGTATGTA TGTATGTGTG TATGTATATA
  TGTGTGTGTA AGTGTGTGTA TAACTGTGTA TGTGTGCTGT GTGTGTATGT TTCCGAGAGC
  AAGGAAAGTT CAGTCAGCAT TGCCTCACAT AACATCCTTC CCACTGGGTC TCCTCTGTCT
  CACTATAGTT CCCACACATC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320900848	CHEV_3_117772949	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243310104					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:117863680 () rs orientation: forward

Symbol	Name	Function Class
Gm65635	predicted gene, 65635	within coordinates
Rr583881	regulatory region 583881	127 bp proximal
Rr583882	regulatory region 583882	401 bp proximal