rs243301374 SNP Detail

Summary

• ID
  rs243301374
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:107601729 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGTGTTCTC TGAAGACAGC
  TACAGTGTAC TTATAAATAA TAAAATAAAT CTTAAAAAAA AAAGACTAAT AGCCAGTAGA
  CAGAAGGACC CAGAAAGCCC TCCCATTCCA GGATGGATCA TTTAGAGCCT GTACCCTAGT
  CAGTGTAGTT CTGGGCTGAA CCTATGCCCC TGATTTCAAG AAGAGAGAGG CCAGGTGTGG
  W
  GGCTTATGCC TATAATCCGA GAACATGGGA GACAGAGGCA GGTGGGTCTC TATGAGTTCA
  AGGTCAGCCT GGTCTGCAGA GTGAGTTCCA GGTCAGCCAA GGGTAATACA GTGAGACTCT
  GCCTCAAAAA AGGAAGAAGA AAAGAGATGA GGGAAGAAAG AAGAAAAGAG GAGAGGAGAA
  AAGAGAAGAG GAGAGGAGGA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321250731	CHEV_4_107417137	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243301374					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:107601729 () rs orientation: forward

Symbol	Name	Function Class
1700047F07Rik	RIKEN cDNA 1700047F07 gene	248 bp downstream
Rr597058	regulatory region 597058	576 bp proximal