rs243276892 SNP Detail

Summary

• ID
  rs243276892
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:44387328 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTTTAAATG CTGAGGTAGA
  AGCCTGGGGC CAGCCTGGGC TATATAGTGA ATACCAGCTC AGTCAGGCCT GCATAATAAC
  AAGGCCTCTT CCCCCCAAAC AACAGACGAA ACCAACCAAC AGCCAAGTCA ACCCAAGTCC
  ATTCCTGAAT TGTTTTCTTC AGGGTGATGA CGCACTTATG GACCTGTAAG GATGGCTCAG
  W
  GGCTTTAGAG TAGTGGCGAC TCTTCCAGAG GCCATGGGTG TATTTCCTAG CACCCAGGTG
  GAAGCTTACA ATGCCTGTAA CTCCAGTTCC AGGAGATCTG ATGCCCTCTT CTGGTGTCTA
  TGGGCACTGC ACACAAAGTA GTGTGCAGAC ACATGGAGAC AAAACACCCA CAAGAACAAA
  TACAATCTCA AGATAAATAT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322940974	CHEV_9_44284114	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243276892					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:44387328 () rs orientation: forward

Symbol	Name	Function Class
C030014I23Rik	RIKEN cDNA C030014I23 gene	within coordinates
Gm10023	predicted gene 10023	1893 bp downstream
Gm22540	predicted gene, 22540	380 bp downstream
Gm47204	predicted gene, 47204	681 bp downstream
Rr677663	regulatory region 677663	1303 bp distal
Rr677664	regulatory region 677664	98 bp proximal
Rr677665	regulatory region 677665	1434 bp proximal
Rr677666	regulatory region 677666	1942 bp proximal