rs243180306 SNP Detail

Summary

• ID
  rs243180306
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:36852880 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ctccccctc accctATAGG TGCTAACTAT
  CACAGAAAGG CAGGCAGGAA GGAATGTTAA CCAGTATGAG CCTAGCAATC ACCATTACAC
  CAATGCATTC AGAAACCTAA AACGAAGCGT GGTGGTTTAG TAGAACACAA TAGAAATTTG
  W
  GAAACTGGCC AAGGAGCTAT AGGACATCTG AATGACAGAA ACGGAAATGA CAGTTTCTCC
  CTCTTACCCG ATGGCACAAG CTTGGGTAGC TGCTCTGAGA ACCAGACAGT TCCCATCCAG
  GACTGCTCCA GAGGGTAGAC AAATGTCAAC                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320705354	CHEV_3_36697653	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243180306					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:36852880 () rs orientation: forward

Symbol	Name	Function Class
Rr575399	regulatory region 575399	1275 bp distal
Rr575400	regulatory region 575400	36 bp distal