rs242796451 SNP Detail

Summary

• ID
  rs242796451
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:13286677 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAAGCTCCG TATCTCCAAC
  TACTTGGAGT TTCAGCTAGA GTTATCCTCA TAGACACCCT GCAGCCTCCC CCATCCCACC
  CAGCATACTT GAGCTGAATC TTCTCCCCCC CCCCTCCTCC GCCTCACACA TGTGTAGCAG
  ATGTGCAGCT TGGCTTTTAT GTGGGTCCCT TAACAACTGG AGCAGAGGCT CAGACTGACT
  S
  CGTTGCCTGC ATGTAGGTCC TGTACCAGCA ACTGGGCTGC CTTGTCTGGC CTCAGTGGGA
  AATGACGTGG CTAGTCCTGC CTGTCAGGAG GGGACTGGGT GGGTTTATAC CCTGGGTGGG
  GAGTGGGGCC AGGGGATGGA GTGGAGGGCG ATGCAGAGCT TGGGGCTGGG GTAGGGTGCT
  TGCGGAGCGT GGGGTGGGAG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321747518	CHEV_6_13236678	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242796451					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:13286677 () rs orientation: forward

Symbol	Name	Function Class
Rr626565	regulatory region 626565	349 bp proximal
Rr626566	regulatory region 626566	1785 bp proximal