rs242792340 SNP Detail

Summary

• ID
  rs242792340
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:18842596 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGAGCCTCC CTAGTCTTGA GGCCTAACcc
  tgctcctcac agcttctcag cctgctggtt tacatcctcc agcacaacct acccatgctt
  ggagccgccc acagtggctt gggccctccc aatcaattat ttatcaagaa aatgcccccc
  M
  cacacacaca cacaaatgtg cctataggcc tgtctgatgg gaaaattttc tcagctgagg
  ttccctcttc ccatatggcc ccagcctgtg ctaagttaca caaccaacac aGCTCTTACT
  CAAGGCTTTT CCTATAGGAA CGTCTTAAAA                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320676626	CHEV_3_18688432	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242792340					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:18842596 () rs orientation: forward

Symbol	Name	Function Class
Gm65711	predicted gene, 65711	within coordinates
Rr374612	regulatory region 374612	within coordinates
Rr573923	regulatory region 573923	425 bp distal