agaGGCAAT AGGCAGACAC ACACAGTTCA GCTTGTTTTG TTGAAGCTGC TAGCCCTGTG TGTTGGGGGT GGTTTTGTTG TCACTCTCTG TGTTGATACA AATAACTATT ACCATATGAT CTGAAGTCCC CTTACCAGAG GCTAGCACCT Y TGCCTGCCCT GCTCCTGAGT GCCTGGGAGA CTTAGTTCTT GTAAGGGGCT TTAGCTCTTA TCTGAAGATC CTGGACTTTG TTTGAAGCAT CCCTCCCTCC CCCCAGAGTT GCAAATGAAA GGCTTTCAGT GCGAGTCTCT CAGAGATTCC Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | LG/J |
SM/J |
---|---|---|---|---|---|---|---|
ss319983878 | CHEV_1_136571603 | CHEVERUD | SCREENING_POP | f | SNP | C | T |
SNP Consensus Information | |||||||
SNP | Consensus Type | LG/J |
SM/J |
||||
rs242777644 | SNP | C | T |
Location: Chr1:134602764 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Rr418973 | regulatory region 418973 | 373 bp distal | ||||||
Rr418974 | regulatory region 418974 | 520 bp distal | ||||||
Syt2 | synaptotagmin II | Intron |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/25/2025 MGI 6.24 |
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