rs242761378 SNP Detail

Summary

• ID
  rs242761378
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:101856868 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCACTTGCG TTATCAGAAG
  GCGATTTCAT AAACCAAACC AAGAAGAGTC CCACATTATT AAACCATTCC CTATGCGTGC
  CTGCCTCAGT CCTCCTTGTT AATCATCCTT GAAAATTTCT GTAGGGTTGT GGGTTCCTCA
  TCTGCTTCAC CACAGGCCAG GGCTGCTTGG GGAGGTGGAA CTCAGGGAGT TAGACTGTGC
  G
  TATCCCACAC TGCCCTAGGC ACCACTCTGG GGTGGGAAAG CACAGTCTGA GGTGTGAGAA
  AGACAGAACT GGTTCCAGGG TCCCTGGGCC TAAGCTGAAG TCGGGCTGTG GGGGACTCAG
  ACTCTTGGAC ACCCAGGCAC AGCTGGAAGT CGTGGAAGAG CAAAGAATGC AGTGGGTCTA
  GCCCAGGGTG GGTGTGTGTG                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321231990	CHEV_4_101672276	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242761378					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:101856868 () rs orientation: forward

Symbol	Name	Function Class
Rr376932	regulatory region 376932	1390 bp downstream
Rr596214	regulatory region 596214	691 bp distal
Rr596215	regulatory region 596215	927 bp distal