rs242705207 SNP Detail

Summary

• ID
  rs242705207
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:60438442 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAAGA TTTGATTTTC AGAACAGGAT
  G
  TGAGGAGGTA TGTGTTAGTA ACCAC                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320786576	CHEV_3_60334943	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242705207					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:60438442 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Mbnl1	muscleblind like splicing regulator 1			Intron
				Noncoding-Transcript-Variant
Rr577418	regulatory region 577418			1862 bp distal
Rr577419	regulatory region 577419			863 bp proximal
Tssr29300	transcription start site region 29300			1764 bp downstream
Tssr29301	transcription start site region 29301			1568 bp downstream
Tssr29302	transcription start site region 29302			1440 bp downstream
Tssr29303	transcription start site region 29303			1282 bp downstream
Tssr29304	transcription start site region 29304			942 bp downstream
Tssr29305	transcription start site region 29305			696 bp downstream
Tssr29306	transcription start site region 29306			213 bp upstream