rs242688024 SNP Detail

Summary

• ID
  rs242688024
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:105444780 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTCCACAAG CATTTTACCA
  ACTGAGTCAT CTCTGCAGCC CAGATTTTAC TTTTGCTGCT TAGCTGTCTA CACTTTTTAT
  TTGCTCCTTT AGCAGACAAC CATAGCCATT TAAAACCCTG AGTCTGATAA TTTAAAAAAC
  TCTGTGTCAT ATCTATGCTT GGTTCTGTGT TGTTTTATAA GACCATTTAA AAAAAAACAA
  W
  CTTTATCATG CCTTGTAATG TTTTGTTAAA ACTGCCATGA TGTACCCATA AGGAACCAAG
  GTCACCTTCA ATGTGAGGCT TTTAATGCCT ATTTGGGGAG AACTTAGGCC CAGCATACTG
  TTTCCAATGG CTGTTGTGAT GAGATTACAC TCTTTTTCTT GTTTGTGCCC TCTCTGTTGT
  TGGGGGTTTT CCTAGAGACT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322370597	CHEV_7_112944087	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242688024					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:105444780 () rs orientation: forward

Symbol	Name	Function Class
Rr652817	regulatory region 652817	1544 bp distal