rs242683513 SNP Detail

Summary

• ID
  rs242683513
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:109241953 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TCTGTATCT AACGTTCTTC TATGTAGCAA
  AATTTGTCTG TTTTTGCTTT ATACTTTTGG GGTTTCCTGA GAGGCCAGGT AAAGCGGCTA
  TCACCAGTGG CATTAATTTT AATGATATGT Caatcaggca tgctgccata tggttgtaat
  T
  ccacaaccta ggacacaggc agcaggatca tgagtttgag gccaacataa gccacctagt
  gatagtccat ctcaaataaa ataaaataaa ataaaataaa ataaaataaa ataaaataaa
  TCCAGAAGGG AGGATTTTAT GGTGAAGTGA                                 
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321253931	CHEV_4_109057361	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242683513					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:109241953 () rs orientation: forward

Symbol	Name	Function Class
Eps15	epidermal growth factor receptor pathway substrate 15	Intron
Rr597307	regulatory region 597307	1967 bp distal
Tssr38341	transcription start site region 38341	1142 bp upstream
Tssr38342	transcription start site region 38342	1242 bp upstream