rs242658948 SNP Detail

Summary

• ID
  rs242658948
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:72284937 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATAG ATAAATGCCT TTAAAATGAG
  C
  TCAGAGGGCT AGGAAGATGG CTCAG                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321821418	CHEV_6_72257947	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242658948					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:72284937 () rs orientation: forward

Symbol	Name	Function Class
Rr632127	regulatory region 632127	515 bp proximal
Sftpb	surfactant associated protein B	Intron
Tssr57087	transcription start site region 57087	1976 bp downstream
Tssr57088	transcription start site region 57088	1924 bp downstream
Tssr57089	transcription start site region 57089	1163 bp downstream
Tssr57090	transcription start site region 57090	1088 bp downstream
Tssr57091	transcription start site region 57091	1026 bp downstream
Tssr57092	transcription start site region 57092	741 bp downstream