rs242555777 SNP Detail

Summary

• ID
  rs242555777
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:141446684 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CACTCAATG TGCAAGTTAT CCCTGGGTTA
  TGAGGAATAA GTGAGCTGTG GCAGTCTTTA TCCTTCTCTG TGTTACAACC TTTCTAGCAT
  AGCTATTCAG CATTTACCag aaagaaagaa agaaagaaag aaagaaagaa agaaagaaag
  R
  aagaaagaaa CCAAAAAAAC AAAAAACAGG AAAGAAAAAT ACATAAGGAA ATAAACACAT
  CAAAACTAGC CACCACAGAA ACTTCCACTT TCCATGGTTT AAAATAGCAT TTTTGTAACC
  CACACTCAGG CTGTGTGCAA AAGTAGCATT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321389262	CHEV_4_141275288	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242555777					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141446684 () rs orientation: forward

Symbol	Name	Function Class
Ddi2	DNA-damage inducible protein 2	Intron
Rr398662	regulatory region 398662	within coordinates
Rr603862	regulatory region 603862	721 bp proximal
Rr603863	regulatory region 603863	1349 bp proximal