rs242546217 SNP Detail

Summary

• ID
  rs242546217
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:86770076 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCGGA GTCCCGGGGG GGCTTTGACT
  M
  AGCAAAGGAC TGCAGGAGTG CTGTG                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321847286	CHEV_6_86743088	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242546217					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:86770076 () rs orientation: forward

Symbol	Name	Function Class
Anxa4	annexin A4	Intron
Rr633515	regulatory region 633515	within coordinates
Rr633516	regulatory region 633516	480 bp proximal
Rr633517	regulatory region 633517	1872 bp proximal
Tssr61864	transcription start site region 61864	428 bp downstream
Tssr61865	transcription start site region 61865	496 bp downstream