rs242534118 SNP Detail

Summary

• ID
  rs242534118
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:13151786 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCAACAATC AACAGATGGG
  ACCTCATAAA ACTGCAAAGC TTCTTTAAAG CAAAGGACAC TGTCTATATC TATCATAACT
  TGAGTTGGAG AATAGTGGCT AAAGGTTTGG CTCAAAGGTC AAGGCTTTTC CTTGCAGTCA
  TGGTTTGATC TCTATAACTG ATTTAAAATA GTTATAATTT CATTATTCCT TAAACTCATA
  R
  TGTTTCAAAT TGGACTCTCC TGATGATTAG ATTGACAGTT AGCCAGGGAA ACTGCACTAA
  CTTTTGACAG GAATAAAGGG ACAAAATCTA GGAACATGCC TTTAATAGCA GTATACCTGA
  AGGTGAGGCA GGAGCCTCAC CTGGAGTTCA AAGCCAGCTT GTGGACTACA TTGTAAAAAC
  CCTGTCTCAA ATAGATAAGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321747172	CHEV_6_13101787	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242534118					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:13151786 () rs orientation: forward

Symbol	Name	Function Class
Rr626556	regulatory region 626556	413 bp proximal
Rr626557	regulatory region 626557	658 bp proximal