rs242527347 SNP Detail

Summary

• ID
  rs242527347
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101075933 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTTCTGATA AAGTCAGACC
  CTTTAGGATT GTTATACTTA AAGGAGACTC CCCTTGGGCG TATAGCTGGG CTGGAGTACG
  GTGTGCAGAG ACAGGGTGGG AAGCATGTGG CATAAGTGCT AAAGCAGTGA CAGAGGGAAG
  GGGAGGGTTG TTTCTATAGG ACATCATGAC TATTAGCAGA GCCTGGGGGA CCTCCCTGCA
  M
  GGGCAGGTTG GGGAGCATGC TACAGGGATT TCATGCAGAT TCCAGGTAGA GGTTTCTAGG
  GAGGAGTTGG ATACTTGGGT TGGAGAGTAA GGGAGGTCTT GAGTGACAGC AGCTCAGAGT
  CAGTCCCTGC AGGGAAAGGG GACACGGTGA GGAGAGTAAC AGGAGAGGAC ACTGGACAGT
  CACAGCTGCA CAGGTGGGGG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320851221	CHEV_3_100972540	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242527347					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101075933 () rs orientation: forward

Symbol	Name	Function Class
Rr375458	regulatory region 375458	within coordinates
Rr581973	regulatory region 581973	1489 bp proximal