rs242524680 SNP Detail

Summary

• ID
  rs242524680
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:43891155 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tggtagctc acaaccatct gtaatgggat
  ctgatgccct cttctggtgt ctgaagagag caatagtgtg tgtgtgtgtg tgtgtgtgtg
  tgtgtgtgtg tgtgtgtgtg tgtgtatcta tacctttatc tatatctata taatctttta
  W
  aaaaaGCCTG AAGCCCACAG AGGCCAGCAG CAGGACCTAG GACCTGACCT TGCTCCCTAA
  GCCCACAGCC CATGCCTCTC TGCTACGCTT ATCTCCACTT GAGGTACCAG GATCCTAAGT
  GGGGACTCCA TGAGCCTCCA GACTTTCCCT                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322939864	CHEV_9_43787941	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242524680					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:43891155 () rs orientation: forward

Symbol	Name	Function Class
Gm10688	predicted gene 10688	381 bp upstream
Rr677493	regulatory region 677493	1533 bp proximal