rs242475357 SNP Detail

Summary

• ID
  rs242475357
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:144369376 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGGCAAGGTA GACAGACACT CCTTGTGTGA CTAACAAGCT
  GACTCAGACA GCAGAGATAC CATAGTAGAA CTGAAAGAGA CCCTCAAGAT GGAGACAGAG
  Y
  TTCCAAACTT GAATCTCAGG AGCCTAAACT CTCAGGAGCC CAAACGATGA TTCAACGCTC
  TTTCGTAGCA GCAGTTTCTA AATGCCCACT ACAATGTGT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321006060	CHEV_3_144326579	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242475357					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:144369376 () rs orientation: forward

Symbol	Name	Function Class
Rr586700	regulatory region 586700	1872 bp distal
Rr586701	regulatory region 586701	697 bp distal
Rr586702	regulatory region 586702	within coordinates
Rr586703	regulatory region 586703	1181 bp proximal