rs242336271 SNP Detail

Summary

• ID
  rs242336271
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:107113049 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    atatctgcc tagacgctgc catgcttccc
  gccataatag actaaacctc tgaaatgtaa gtcagcccca attaaatgtt ttgttttata
  agagttgcca gggtcatggt atctcttcac gaccatgaaa atcctaaGAC ACCCATCTCA
  Y
  TCAAGCCCAG CCTTGGCACC AGCCCCAAAT CCCCATAGGA TCTCGTGGGT CAGATGCTAG
  CACTGTAAAT GCTGAGGAGG GGTGGGGCAG GATTCCCTGC TGACCTGGAA GACCAGTGCT
  GCCCTGAATC CCTTAAGACA CACACAGTAG                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320864603	CHEV_3_107008651	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242336271					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:107113049 () rs orientation: forward

Symbol	Name	Function Class
Rr582930	regulatory region 582930	222 bp proximal
Rr582931	regulatory region 582931	446 bp proximal
Rr582932	regulatory region 582932	759 bp proximal
Rr582933	regulatory region 582933	1991 bp proximal