rs242307280 SNP Detail

Summary

• ID
  rs242307280
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:74793147 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCCAGAGCC TGGTCCATCT
  GAGCCTCCCC ATTACCATTT CCTTGTTCCC TGAGTCTGTC AAGGGCAGAC TTTATAGCTT
  CCTCTTGCAC ACATTAAAGA ATGTTGGCTC TAGAGGTGGA ATATTGAACT TGGAGCTCTG
  TAAACCTTGC AAATTTCAGT CCATAACCGA TTTTCTAATA GCGCACTTAA TCTTCGCTTT
  C
  CTTTCACCCC CTCCCCAGAT CGATATTGAT CATCAAATGC TTCTGTGTCT CTCAAGAAAG
  GGTTGAACTT GCTTCTTGCT TGACCTCACG TGGGGGACGG GTTGAGAAGA TTTTGTTCTT
  AGGATACCAC AGACTAAGCC CTTACATAAA ACGTCTCTAA ATGAGACTGT AGCGAGTATC
  ACCATCTTCC AACCGGATCC                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320348835	CHEV_2_74800860	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242307280					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:74793147 () rs orientation: forward

Symbol	Name	Function Class
Igs15	intergenic site 15	within coordinates
Rr559413	regulatory region 559413	1465 bp proximal
Rr559414	regulatory region 559414	1731 bp proximal