rs242284043 SNP Detail

Summary

• ID
  rs242284043
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:95291640 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAATGAAGAA TAAAGCAATA
  AAATAAGCAG TGACCATCAA CACCAAATGT AATGAGTTTC CACCTAAGTG TGATACTAAC
  ACAGCACATA CGTTATATAA TTAAGAGAAA AGACCAGAAA CTGATTTTGT CGCAATCCAG
  TTCCAGTGAG AGCCCCTGGA GTTCCAGTGC ACGTGTGGGT GGGACATGTG ACCTGAATAC
  K
  TCTCTGCAAA TACTATGCAG AAGCCTAACG GCATCCCTCT GCTCCATCAG TTTCCAAACC
  AATGTCCAAT TCCCATTTAA TGAATTCAAA CTAGCGAATT CAACACAACC ATTCCACAAA
  GAATACATCA GCCCTGTCAT TGTGGATTAA GGCATGAAAG CTAAATGTGA TATGGACAGA
  TGTAAACATT ATTACATGCA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323100061	CHEV_9_95310006	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242284043					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:95291640 () rs orientation: forward

Symbol	Name	Function Class
Gm8449	predicted gene 8449	1082 bp downstream
Gm35915	predicted gene, 35915	1033 bp downstream
Gm37805	predicted gene, 37805	1019 bp downstream
Rr684791	regulatory region 684791	1303 bp distal
Tssr90912	transcription start site region 90912	1808 bp upstream