rs242265138 SNP Detail

Summary

• ID
  rs242265138
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:111537073 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGGAAGGAC CAGCCAACTT
  GGGATCCAGT CCCTGGGCAG GCACTCATCC CTGACACTAT TACTGATGTG CTGTGCTTGT
  AAATAGGAGC CTAGCCTGGC TGTCCTCCTA GAGGCTCTAC CCACAACTGA TTGAGACAGA
  TGCAGATACT TATAGCCAAG TATTGTACTA AGGTTGGGAA CCTCTATGGA AGAGTTAGGC
  R
  AAGGACTGAA GGAGCCAAAC AGGATGCCAA TCCCATAGGA AAAACAATAG TATCAAGTAA
  CCCAGACCCC TTGGCGCTTC TAGAGACTGA GCATACACAG GCTAGCCTAA GTCCCCTGGC
  ATATATGTAG CAGAGAACTG CTTCATCTGG CCTTAGAGGA AGAGAATGTA CCTAATCATG
  TAAAGACTTG ATCCCCCAGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321906012	CHEV_6_111510106	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242265138					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:111537073 () rs orientation: forward

Symbol	Name	Function Class
Grm7	glutamate receptor, metabotropic 7	Intron
Rr379936	regulatory region 379936	within coordinates
Rr636272	regulatory region 636272	435 bp distal