rs242190776 SNP Detail

Summary

• ID
  rs242190776
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:131821005 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CCTTCCATC GTGCACTGAA CTTACCATCC
  CATGATGTAC CGCTACCTTT TGCCTGGCTG ACTTACGACC TCATGATGTA TGATTGTCCT
  TTGTCTTACA AAATATGTTT TCACAgactg gagagaggac tcagcagtta agtgcactgg
  Y
  ttctccttta gaggaccgag gtttgattcc cagcatccac atggtagctc acaactatct
  gttactccag tcccaggaga tctgaaggcc tcttccagcc ttgtctggaa cctagcatgc
  tgtgcacaga tatacatgca ggcaaaacaa                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321330493	CHEV_4_131649609	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242190776					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:131821005 () rs orientation: forward

Symbol	Name	Function Class
Gm13214	predicted gene 13214	197 bp upstream
Rr600873	regulatory region 600873	188 bp distal
Rr600874	regulatory region 600874	923 bp proximal
Rr600875	regulatory region 600875	1453 bp proximal