rs242128035 SNP Detail

Summary

• ID
  rs242128035
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:37258896 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TCCTCTGCT AAGAGAAATC TACAAACACA
  GGGGATTGTG TTATTCGCGT CACTGAGAGC AAGAGGAGAA CGTCTGATTT GGGCATAGTA
  TTCCAAGCAC AGTTTATCGA AGTAACTGGA CTCATAAATA CAAAGTTGGA AAGCATCTCA
  W
  GTGTACTGGG TTCTCCCTGG GAGCAAGTGC CTGTCACTGT CAGGGGAGAC CTCTCCTGGA
  GGGCACAAAT ACTGCAACGT GTCAGTGATC CAGTTTCAGG AGTGAAAAAT AATGTTTTGT
  GCAAATGCAT TAATATTCTT CAAAATCTAG                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320708262	CHEV_3_37103669	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242128035					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:37258896 () rs orientation: forward

Symbol	Name	Function Class
Gm64461	predicted gene, 64461	within coordinates
Gm64469	predicted gene, 64469	within coordinates
Rr367425	regulatory region 367425	280 bp downstream
Rr367426	regulatory region 367426	587 bp upstream
Rr397645	regulatory region 397645	469 bp downstream
Rr575433	regulatory region 575433	within coordinates
Rr575434	regulatory region 575434	623 bp distal
Rr575435	regulatory region 575435	31 bp proximal
Rr575436	regulatory region 575436	503 bp proximal