rs241947429 SNP Detail

Summary

• ID
  rs241947429
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:107490213 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCTGATGCT CTAACCCTGC
  TGGGTGCAGA GGTGCTGTGG ACAGGGGGGG GGCTGCATGC TGCCCAGAGC TGGAATCAGG
  CTCTATCCAG CAGGCAGAGC AGAACTCAGG ACAGCCTATT GGGTAGTTCC TCCTTCTGAA
  TTACCTAAGT CAACCCCTAC TCAAGTCAGT CCCAGGGTCC AGATCTAGTG AAGATCCTAA
  S
  GCTCAGACCA AAGAGAAGCT GAGGCCCTAT GGAGGGCTCT TGAGTCGCCT GTGAGCAGCA
  CAGTGGGGGA CAGAGGACCA CGGACACTGG ACATGGGGCC AGTCAGGGAG GCCACCAGTA
  AACACAGACC TGTGGCTCCA TCATCCCTGG GGGCTTTGCT GTGTGTGCAT ACACACGTCC
  TCTGTGTCTG TGTTCTCCCT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321249686	CHEV_4_107305621	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241947429					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:107490213 () rs orientation: forward

Symbol	Name	Function Class
Glis1	GLIS family zinc finger 1	Intron
Rr597028	regulatory region 597028	1781 bp proximal