rs241871556 SNP Detail

Summary

• ID
  rs241871556
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:4406560 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCTTACCTG TTAATGGATA
  GTGCTTATCG GAGAGTATAG TTCTTGTGTC ACGAATCTCA CTAAGTGTTG TGTCTCAACT
  AGATCACTCA TCATCATCAT CATCATGATA CAAACAAATG CAAGACCGCA CACTCATGTC
  CCCTCCTGCC TCTGGTTGAA GTTCCCGCCT CTTTTATACT ACAGTGCTAC TTAAGATTGC
  Y
  TGAGTGTGCT GTCTTTACTT TCTCTCTTGA GCGTCCTTCG GTCAGGCATC TGATGAGATG
  AGTCAATCAT TGATGATGGC TCTGGTGCCT GCCTTAGCAC AGAGCCACAG GTGGCCTCTG
  AGACTTCATC TTCCTTGGCT TATCATCCCA ATAGCAAGAT TGGGTACAGC GTTCATTGAT
  GAAAAGCCTT CTGTACTTGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321727395	CHEV_6_4356560	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241871556					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:4406560 () rs orientation: forward

Symbol	Name	Function Class
Rr626010	regulatory region 626010	1272 bp proximal
Rr626011	regulatory region 626011	1354 bp proximal