rs241835602 SNP Detail

Summary

• ID
  rs241835602
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:105023246 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGGAACTAA AGTGCCCAGA GGTTCCATAT
  ACTTACTAAG AGGTTCTTGG ACTTCTGTTT TGTGCACGTT TCTATCTATG GATACGCAGC
  CCCAGTTCCG AACAAGCCAC TTCTCCTACC TTCCTCTGAA CATTCACAGC TTGCATCTTC
  Y
  ACACTAAGAC CCCAGCTAGA GCCCTTTTTA CTTTACAGTT TCTGAGTTCA GCTTGATCAG
  CAAAGGAAAG GGACTTAGTA AAAGGAAGAG AAAGAAGGGG ATGAAGGAAG AAGTAACAGC
  TGAGAAGTTA AAATCTTGAA AGAAAGGAAA                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320861446	CHEV_3_104918848	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241835602					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:105023246 () rs orientation: forward

Symbol	Name	Function Class
Gm40118	predicted gene, 40118	within coordinates
Rr582673	regulatory region 582673	1289 bp distal
Rr582674	regulatory region 582674	1416 bp distal
Rr582675	regulatory region 582675	504 bp proximal