rs241732583 SNP Detail

Summary

• ID
  rs241732583
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:146129679 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATAAGATAG CTATAGAAAT
  ATTATTTTCA GTGTTTAGTT CTTTTAACTA AGAAGCCTGG AAGGAAGTCT GCTTCTGTTT
  TATTATGCAT TTTATGCTTC ACTTGATTAT TTTATGGGCG GGTGTTTTGC CTCCATGTCT
  GTGCACCATG TCCATGGTTG GTACCTGTGG AGGCCAGGAG AGGGCGCTGG CTCCCATGGA
  A
  CTGGAGCCTA AAGGTGCTGA CAGCTGAGCC CAGGTCCGCT GCAAGAGCCG CATGCACTTC
  TCAGCACCGA GCGAGCCATC TTCCCAGCCC CGGGAGTCTA TTTCTTAAAA AGCCCCTAAA
  CAGATACAGT TTATTTTAAC CCTATTTAAT TAGTGTTTAA TAATGGGCAA TGAATCTCTA
  ACCAATCATA CGTACGCATA                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321010305	CHEV_3_146086888	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241732583					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:146129679 () rs orientation: forward

Symbol	Name	Function Class
Rr587026	regulatory region 587026	10 bp distal
Ssx2ip	SSX family member 2 interacting protein	Intron