rs241640488 SNP Detail

Summary

• ID
  rs241640488
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:62736348 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACCTCTGGG CAGGTGGTCC
  TGGGTTCTAT AAGAAAGCAA GATGAGCCAG GCCTTGGTGG TGCACAGCAC TTGGGAGGCA
  GAGGCAGGCA GATCTCTGAG TTCAAGGCCA GCCTGGTTTG CAAAGAGAGT TCACATTGTC
  TCAAAAATCA GAACAAAACA CAACAAAAAG AAAAGAGAAG AAAGAAAAAG AGAGAGGGAG
  W
  GAGAGAGAGA GAAAGTAAGC AGGCTGAGCA AGTCACAAGG AACAAGCTGT TGCGGTAATT
  TCTAACCCCG ATAAGCCTGT ATAAAAGACA TATAACCCAG TTATATTGAT AAGCTATATG
  CCTAGATTGG GCAGATCTAT CACTATACTA ACTTATTCTC TAGTTATGAG ACCCCTTGCT
  GCTTGCAGCT TCTCCGGGCC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323704654	CHEV_11_62659024	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241640488					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:62736348 () rs orientation: forward

Symbol	Name	Function Class
Fbxw10	F-box and WD-40 domain protein 10	1547 bp upstream
Rr386163	regulatory region 386163	within coordinates
Rr448938	regulatory region 448938	1404 bp proximal
Tssr102067	transcription start site region 102067	1540 bp upstream
Tssr102068	transcription start site region 102068	1568 bp upstream
Tssr102069	transcription start site region 102069	1589 bp upstream